CDS

Accession Number TCMCG016C06815
gbkey CDS
Protein Id OMO90543.1
Location complement(join(25814..25891,25985..26098,26292..26405,27154..27214,27312..27512,27788..28860,28939..29064,29198..29265,29361..29469,30032..30116,30207..30323,30472..30633,33008..33037,33130..33163,33486..33621,33924..34046))
Organism Corchorus capsularis
locus_tag CCACVL1_07347

Protein

Length 876aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01008445.1
Definition hypothetical protein CCACVL1_07347 [Corchorus capsularis]
Locus_tag CCACVL1_07347

EGGNOG-MAPPER Annotation

COG_category S
Description transducin family protein WD-40 repeat family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K17985        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04137        [VIEW IN KEGG]
ko04140        [VIEW IN KEGG]
map04137        [VIEW IN KEGG]
map04140        [VIEW IN KEGG]
GOs GO:0000045        [VIEW IN EMBL-EBI]
GO:0000422        [VIEW IN EMBL-EBI]
GO:0000423        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005929        [VIEW IN EMBL-EBI]
GO:0005930        [VIEW IN EMBL-EBI]
GO:0006914        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010506        [VIEW IN EMBL-EBI]
GO:0010508        [VIEW IN EMBL-EBI]
GO:0010562        [VIEW IN EMBL-EBI]
GO:0010656        [VIEW IN EMBL-EBI]
GO:0010660        [VIEW IN EMBL-EBI]
GO:0010662        [VIEW IN EMBL-EBI]
GO:0010664        [VIEW IN EMBL-EBI]
GO:0010665        [VIEW IN EMBL-EBI]
GO:0010667        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016236        [VIEW IN EMBL-EBI]
GO:0019216        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0021915        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030139        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031625        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032838        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033674        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042325        [VIEW IN EMBL-EBI]
GO:0042327        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043066        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0043085        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043523        [VIEW IN EMBL-EBI]
GO:0043524        [VIEW IN EMBL-EBI]
GO:0043549        [VIEW IN EMBL-EBI]
GO:0043550        [VIEW IN EMBL-EBI]
GO:0043551        [VIEW IN EMBL-EBI]
GO:0043552        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044093        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044389        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044441        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045335        [VIEW IN EMBL-EBI]
GO:0045834        [VIEW IN EMBL-EBI]
GO:0045937        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051338        [VIEW IN EMBL-EBI]
GO:0051347        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0061726        [VIEW IN EMBL-EBI]
GO:0061912        [VIEW IN EMBL-EBI]
GO:0061919        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090218        [VIEW IN EMBL-EBI]
GO:0097014        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098780        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1901214        [VIEW IN EMBL-EBI]
GO:1901215        [VIEW IN EMBL-EBI]
GO:1903008        [VIEW IN EMBL-EBI]
GO:1903725        [VIEW IN EMBL-EBI]
GO:1903727        [VIEW IN EMBL-EBI]
GO:1905037        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTTGCTGCCTTGATCTGAAGTATTGTCTTGACCAGTGTCAATTCATTGGTGGGATCAAATTTGGTGAGATGGAGCATGACTGTCTTATTGCTCGTGGTGTATCAGCCAACTTACATGAGCTGGATTATGGCTCTGCTTTAGACTGTGGAGAGGAGACATTTTGTACTCAGGTTTGCAGGATTGGAACCCACTCATTTGGGGTCTGCGTAAATGGGGCTCAAGGAGCTGGATACACTACTTACAACTGGATTGTTGATTGGTTTGTGCAACATATTGGCTCTCAGATCAGCATGATGAAAGCCATCAGGGATTGTTCCAGCCGTAAAAGTGTCTTACATTTGTTGGGGATGAGAGAAGTCTCTCCCAGAACAAAGTATGTGCCAAAAAGACGGTGGGGAGAAACAGCTAACTTGGATGCTAAGTCAACATCCGGGAGTAAAAGTGAACCCATTAGAGATGCCAGGCGTGGCCTTGTTTCATGGGCTGAGGAAGAGTCTTTGCGGCATTTATCTGGAAAATATTGTCCTCTACTGCCTCCCCCAAGGTCAACAATTGCAGCAGCGTTTAGTCCTGACGGAAGAATACTTGCTTCAACCCATGGTGATCACACTGTGAAGATTATTGATTGTGAAAGGGGAAAATGCTTAAAGGTGTTGAGCGGTCATCAGAGGACACCTTGGGTGGTTAGATTCCACCCATTGCATCCAGATATTCTTGCAAGTGGGAGCTTGGATCATCAAGTTCGTTTGTGGGATGCAAAGACGGCAGAGTGTATTGGATCTCGTGATTTCTATCGTCCAATTGCTTCTATTGCTTTTCATGCAGAAGGAGACCTTCTTGCAGTTGCATGTGGTCACAAGTTGTACATATGGCAGTACAACAAGAAAGGAGAGTCTTCCTCACCAGCCATTGTATTAAAGACAAGACGATCTCTCCGAGCCGTACACTTTCACCCGCATGCTGCTCCATTTCTTTTGACTGCTGAGGTCAATGATCTTGACTCTTCAGATCCTTCAATGACTCGGGCAACATCACTGGGTTACTTGCATTATCCTCCTCCTGCAGTTTTTGTCACAACTGGTCATTCTAATGACGGTGTTGGTTTGACAGCTGATCCTTCTATTATGTCATTGCCTTGTGTGACTGTGCCTTCATTTCCCATTGATGATTCGAGAATGGATCTGCAATATGTTAGTAGGCTTGTTGGTTCAACTGGCATGCAAGTTGCACGATCTCCTTCGATGCAATTTCAAACAGATGTAACTATGGGAGAACAGAATCATAGTACAGCATCTCCCATGCAGACATTTCCTGCAATTCCTTCCGGCTTGTATCCTGGTACAGAAGCTCCTTTAAATAGTTCTGTTCCTTATAGAATGGGAAATGTTGCTACTGATGCCTCAATTGATGGTATGGAAACTGATGAAATACACCCCGTAAGGGAAAACAGAGAAGCAAACTCTTCTAGCGTTGATCCTTATAGTAATGGACTGAGTGGAGTGCCTAGACGTGTTCTCAACCAAATGGATGTCAGGGAATTTGGGCAAGTTCAGCCGTTTTTACCCTTTGGAGCAATTTCTTGGGAGTTGCCTTTTCTGCAAGGGTGGTTAATGGGACAACAAACTAATTTTCCCTCTATGCATCCTCATAGTGGCATTGGTCATCAAAATTTAGTTCAATACATGGGTTCTTCCTCAACATTGCAGTCATTGATTGATAACATGGAGAGTGCAGCAACTTCTTTGGGAATACAGAACAACATTAGCCAATCTGCGGTTTCTGGAAGAACTGGATTGCAACAAGTTTCACAATCTCGCTTCTCAGTTTCTCAATCTGGTGAAGTTGACGTGCCTAGTAATTCTCTTCGTGATGGTGCTGATACTCAACAAACTTTAAGTAGGATCCAATCTGAACTTGCCACATCACTGGCTGTAGCTGCAGCGGCAGAGTTACCTTGCACGGTGAAACTTCGAGTATGGTTGCATGATATAAAAAATCCTTGTGCAGTATTAAATGCTGACAAATGCCGCTTAACCATACCACATGCTGTCCTTTGCAGTGAAATGGGTGCCCATTTTTCACCTTGTGGGAAATTTTTAGCTGCTTGTGTTGCTTGTGTGCTTCCTCATGTGGAAGCTGATCCTGGATTACAGGCATTGGTCCAACAAGATTCTGGGCCTGGAACGTCCCCAACTCGACACCCAATCTCAGCACATCAAGTCGTGTATGAGCTCCGGATATATTCTCTTGACAAGGCAACCTTTGGCTCGGTGCTTGTTTCACGTGCAATTAGAGCTGCTCATTGTTTGACATCAATCCAGTTCTCACCCACTTCTGAGCACATATTACTTGCCTATGGTCGGCGTCATGGTTCTCTTCTTAAAAGCATCGTCATTGATGGGAAAACTGCATCACCTATATACACAGTACTAGAGGTATATAGAGTTTCTGATATGGAATTGGTGAGAGTACTTCCCAGTTCAGAGGATGAGGTAAATGTAGCATGTTTTCATCCTTTCGCTGGAGGAGGTCTTGCGTATGGAACCAAGGAAGGAAGACTGAGTGTTCTTCAGTATGATGGTTCTCATGGTACCGATTACAGCATACCAAATTACTTGTCAGAATAA
Protein:  
MICCLDLKYCLDQCQFIGGIKFGEMEHDCLIARGVSANLHELDYGSALDCGEETFCTQVCRIGTHSFGVCVNGAQGAGYTTYNWIVDWFVQHIGSQISMMKAIRDCSSRKSVLHLLGMREVSPRTKYVPKRRWGETANLDAKSTSGSKSEPIRDARRGLVSWAEEESLRHLSGKYCPLLPPPRSTIAAAFSPDGRILASTHGDHTVKIIDCERGKCLKVLSGHQRTPWVVRFHPLHPDILASGSLDHQVRLWDAKTAECIGSRDFYRPIASIAFHAEGDLLAVACGHKLYIWQYNKKGESSSPAIVLKTRRSLRAVHFHPHAAPFLLTAEVNDLDSSDPSMTRATSLGYLHYPPPAVFVTTGHSNDGVGLTADPSIMSLPCVTVPSFPIDDSRMDLQYVSRLVGSTGMQVARSPSMQFQTDVTMGEQNHSTASPMQTFPAIPSGLYPGTEAPLNSSVPYRMGNVATDASIDGMETDEIHPVRENREANSSSVDPYSNGLSGVPRRVLNQMDVREFGQVQPFLPFGAISWELPFLQGWLMGQQTNFPSMHPHSGIGHQNLVQYMGSSSTLQSLIDNMESAATSLGIQNNISQSAVSGRTGLQQVSQSRFSVSQSGEVDVPSNSLRDGADTQQTLSRIQSELATSLAVAAAAELPCTVKLRVWLHDIKNPCAVLNADKCRLTIPHAVLCSEMGAHFSPCGKFLAACVACVLPHVEADPGLQALVQQDSGPGTSPTRHPISAHQVVYELRIYSLDKATFGSVLVSRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGKTASPIYTVLEVYRVSDMELVRVLPSSEDEVNVACFHPFAGGGLAYGTKEGRLSVLQYDGSHGTDYSIPNYLSE